BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B11SP1|AL430010
(827 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig998 951 0.0
>3x_Contig998
Length = 4885
Score = 951 bits (475), Expect = 0.0
Identities = 494/505 (97%), Gaps = 1/505 (0%)
Strand = Plus / Minus
Query: 1 tattccaattggtccccgtataatgcaagaaaccacaagcmggctgatattccaacaagc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 522 tattccaattggtccccgtataatgcaagaaaccacaagccggctgatattccaacaagc 463
Query: 61 cagttgaagcatgtatattatgmcttttttgtggtggatgctaagtcaggagctgttaaa 120
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 462 cagttgacgcatgtatattatgccttttttgtggtggatgctaagtcaggagctgttaaa 403
Query: 121 tctagtgattcgtggtcaractttgagctgcctttgagtgtgggtgtaaaaggttgcatc 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tctagtgattcgtggtcagactttgagctgcctttgagtgtgggtgtaaaaggttgcatc 343
Query: 181 aaagagcttcaaaaaataaaattagagtyaaagcacgaattcaagactattttatgcctt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 342 aaagagcttcaaaaaataaaattagagtcaaagcacgaattcaagactattttatgcctt 283
Query: 241 ggtggttggtccaacagagaggcctatwagadaattgcyaagtcagagaaaaaggtgaag 300
||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||
Sbjct: 282 ggtggttggtccaacagagaggcctataagaaaattgccaagtcagagaaaaaggtgaag 223
Query: 301 aagtttattgaaacagcggtggattgtatgttcaggtatgggtttgatggaatagacttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aagtttattgaaacagcggtggattgtatgttcaggtatgggtttgatggaatagacttg 163
Query: 361 gattgggagtttcccgaggaggacagtwatgaaccgatagtttatttagaaatgatgaga 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 162 gattgggagtttcccgaggaggacagtaatgaaccgatagtttatttagaaatgatgaga 103
Query: 421 ggaataagagaaggtatggatcagttagaaagacaaatttttggttcacccgctgaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ggaataagagaaggtatggatcagttagaaagacaaatttttggttcacccgctgaagag 43
Query: 481 aaggaccatccacatttccwacttt 505
||||||||||||| ||||| |||||
Sbjct: 42 aaggaccatccac-tttccaacttt 19
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5447
Number of Sequences: 1807
Number of extensions: 5447
Number of successful extensions: 110
Number of sequences better than 1.0e-20: 1
length of query: 827
length of database: 10,358,551
effective HSP length: 16
effective length of query: 811
effective length of database: 10,329,639
effective search space: 8377337229
effective search space used: 8377337229
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)